STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5255Conserved hypothetical protein. (242 aa)    
Predicted Functional Partners:
ebA5251
Predicted S-adenosylmethionine-dependent tRNA (guanine-N(7)-)-methyltransferase.
       0.747
secA
Preprotein translocase SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.
   
 
 0.600
padD
Phenylacetyl-CoA:acceptor oxidoreductase.
  
     0.567
ebA4071
Hypothetical protein.
  
     0.508
ebA5250
Putative ATP-dependent Lon protease.
       0.505
ebA5249
Conserved hypothetical protein.
       0.503
ebA3587
Hypothetical protein.
 
     0.475
ebA2239
Hypothetical protein.
  
     0.472
c2B001
Hypothetical protein.
  
     0.445
ebA5188
Hypothetical protein.
  
     0.438
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.