STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcrABenzoyl CoA reductase subunit. (303 aa)    
Predicted Functional Partners:
bcrC
C-subunit of benzoyl-CoA reductase.
 0.995
bcrB
Benzoyl CoA reductase subunit.
 
 0.995
bcrC-2
Benzoyl CoA reductase subunit.
 0.990
bcrB-2
Benzoyl CoA reductase subunit.
 
 0.989
bcrD
Benzoyl CoA reductase subunit.
 
  
0.973
bclA-2
Benzoate-CoA ligase.
 
  
  0.923
bclA
Benzoate-CoA ligase.
  
  
 0.921
dch
dienoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
  0.915
hcrA
4-hydroxybenzoyl-CoA reductase, alpha subunit.
    
  0.901
hcrC
4-hydroxybenzoyl-CoA reductase, gamma subunit.
    
  0.901
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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