STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5307Putativ ABC-transporter. (253 aa)    
Predicted Functional Partners:
ebA5306
Putative ABC-transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
ebA2706
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.990
ebA3170
Putative ABC transport protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.989
ebA3425
Possible ABC transporter, permease protein precursor; Belongs to the binding-protein-dependent transport system permease family.
 
 0.983
ebA5304
Putative ABC-transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.977
ebA5303
Putative ABC transporter subunit.
 
  
 0.926
ebA5309
Putative ABC-transporter.
 
  
0.915
ebA3559
Putative branched-chain amino acid transport system protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.914
livM
Predicted branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.885
ebA3426
Probable transmembrane ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.884
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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