STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ebA5316Putative ABC transporter,periplasmic binding protein. (380 aa)    
Predicted Functional Partners:
ebA3559
Putative branched-chain amino acid transport system protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.949
ebA3558
Putative branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.864
ebA5317
Long-chain-fatty-acid-CoA ligase (EC 6.2.1.3).
 
     0.824
ebA5321
Probable acyl-CoA dehydrogenase.
     
 0.743
ebA2706
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.696
ebA3170
Putative ABC transport protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.673
ebA3560
Amino-acid composite ATP-binding transmembrane ABC transporter protein.
 
  
 0.662
ebA5306
Putative ABC-transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.655
ebA5318
Putative enoyl-coa hydratase/isomerase.
       0.617
ebA5319
Putative beta-ketothiolase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.617
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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