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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5317Long-chain-fatty-acid-CoA ligase (EC 6.2.1.3). (624 aa)    
Predicted Functional Partners:
ebA5318
Putative enoyl-coa hydratase/isomerase.
 
 
 0.887
ebA5316
Putative ABC transporter,periplasmic binding protein.
 
   
 0.862
ebA5319
Putative beta-ketothiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.785
boxC
Benzoyl-CoA-dihydrodiol lyase; Enoyl-CoA-hydratase/isomerase involved in isomerisation and hydrolytic ring opening of 2,3-dihydro-2,3-diol intermediate of benzoyl-CoA.
 
 
 0.758
boxB
Benzoyl-CoA oxygenase component B.
  
     0.718
ebA5320
Putative 3-hydroxyacyl-CoA dehydrogenase precursor; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.712
fdhB
Formate dehydrogenase, NAD(P) reducing, beta subunit.
    
 
 0.691
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
 0.663
marR-4
Bacterial regulatory protein, MarR.
  
   
 0.644
ebA2315
Fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase.
  
 
 0.638
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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