STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctP-2Predicted TRAP dicarboxylate transporter, DctP subunit. (349 aa)    
Predicted Functional Partners:
dctM-2
DctM domain-containing protein; Conserved hypothetical protein,predicted TRAP C4-dicarboxylate transport system permease DctM subunit,DedA falily.
 
  
 0.951
ebB188
Conserved hypothetical protein.
 
  
 0.934
DctM
C4-dicarboxylate uptake permease.
 
  
 0.906
dctM
C4-dicarboxylate transport system permease, large subunit.
 
  
 0.870
dctQ
C4-dicarboxylate transport system,permease small subunit.
 
  
 0.784
ebA733
Hypothetical protein.
 
     0.776
ebA5361
Hypothetical protein.
       0.773
ebA3298
Conserved hypothetical protein, possible small subunit of monooxygenase.
  
     0.443
hbcL1
4-hydroxybenzoate CoA ligase.
  
    0.442
ebA3297
Putative aromatic monooxygenase.
  
    0.429
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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