STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dctM-2DctM domain-containing protein; Conserved hypothetical protein,predicted TRAP C4-dicarboxylate transport system permease DctM subunit,DedA falily. (439 aa)    
Predicted Functional Partners:
ebB188
Conserved hypothetical protein.
 
 
 0.972
dctP-2
Predicted TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.941
dctP
C4-dicarboxylate-binding periplasmic protein.
 
  
 0.903
DCTP
Dicarboxylate transport, gene: DCTP OR PM1525.
 
  
 0.888
DCTP-2
Dicarboxylate transport protein.
 
  
 0.888
dctQ
C4-dicarboxylate transport system,permease small subunit.
 
 
 0.862
ebA733
Hypothetical protein.
 
     0.661
hbcL1
4-hydroxybenzoate CoA ligase.
       0.655
ebA5371
Hybrid sensor component of two-component regulation system.
       0.510
ebA5375
Sigma-54 dependent DNA-binding response regulator.
       0.510
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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