STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5384Conserved hypothetical protein, similar to putative regulatory protein involved in in phenol degradation. (309 aa)    
Predicted Functional Partners:
pdh
Probable phenylacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.559
ebA5380
FAD dependent oxidase.
  
    0.551
ebA602
Glycosyltransferase family protein.
  
     0.500
ORF3
Putative regulatory protein,conserved in anaerobic benzoate degadation gene clusters.
  
     0.435
ebA5188
Hypothetical protein.
 
     0.433
ebA3711
Hypothetical protein.
  
     0.432
ebD73
Conserved hypothetical protein.
  
     0.428
ebA3188
Conserved hypothetical protein.
  
     0.426
ebA4574
Conserved hypothetical protein.
  
     0.424
ebA741
Predicted acetyltransferase.
  
     0.423
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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