STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5403Organic acid-CoA ligase (ADP forming). (694 aa)    
Predicted Functional Partners:
padI
Phenylglyoxylate:acceptor oxidoreductase.
 
   
 0.739
padG
Phenylglyoxylate:acceptor oxidoreductase.
 
 
 0.697
padD
Phenylacetyl-CoA:acceptor oxidoreductase.
 
     0.684
ebB192
Predicted thioesterase.
 
     0.684
padB
Phenylacetyl-CoA:acceptor oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.667
padE
Phenylglyoxylate:acceptor oxidoreductase.
 
   
 0.625
padF
Phenylglyoxylate:acceptor oxidoreductase.
 
   
 0.625
padH
Phenylglyoxylate:acceptor oxidoreductase.
 
     0.619
ORF3
Putative regulatory protein,conserved in anaerobic benzoate degadation gene clusters.
  
 
   0.574
padJ
Anaerobic phenylacetate CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
       0.568
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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