Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| degQ | ebA5471 | ebA5470 | ebA5471 | Serine protease DegQ/MucD; Belongs to the peptidase S1C family. | Conserved hypothetical protein. | 0.835 |
| degQ | rpoE2 | ebA5470 | ebA5463 | Serine protease DegQ/MucD; Belongs to the peptidase S1C family. | Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. | 0.653 |
| degQ | rseA | ebA5470 | ebA5464 | Serine protease DegQ/MucD; Belongs to the peptidase S1C family. | Anti sigma-E protein. | 0.881 |
| degQ | rseB | ebA5470 | ebA5465 | Serine protease DegQ/MucD; Belongs to the peptidase S1C family. | Putative sigma factor regulatory protein. | 0.697 |
| degQ | rseC | ebA5470 | ebA5468 | Serine protease DegQ/MucD; Belongs to the peptidase S1C family. | Hypothetical protein, INTERPRO suggestion: probable positive regulator of sigma(E). | 0.824 |
| ebA2146 | rpoB | ebA2146 | ebA3818 | Probable regulator protein containing CheR-and CheB-like domains. | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.434 |
| ebA2146 | rpoE2 | ebA2146 | ebA5463 | Probable regulator protein containing CheR-and CheB-like domains. | Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. | 0.588 |
| ebA5471 | degQ | ebA5471 | ebA5470 | Conserved hypothetical protein. | Serine protease DegQ/MucD; Belongs to the peptidase S1C family. | 0.835 |
| ebA5471 | rpoE2 | ebA5471 | ebA5463 | Conserved hypothetical protein. | Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. | 0.655 |
| ebA5471 | rseA | ebA5471 | ebA5464 | Conserved hypothetical protein. | Anti sigma-E protein. | 0.658 |
| ebA5471 | rseB | ebA5471 | ebA5465 | Conserved hypothetical protein. | Putative sigma factor regulatory protein. | 0.658 |
| ebA5471 | rseC | ebA5471 | ebA5468 | Conserved hypothetical protein. | Hypothetical protein, INTERPRO suggestion: probable positive regulator of sigma(E). | 0.804 |
| rpoA | rpoB | ebA3853 | ebA3818 | DNA-directed RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
| rpoA | rpoC | ebA3853 | ebA3819 | DNA-directed RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
| rpoA | rpoE2 | ebA3853 | ebA5463 | DNA-directed RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. | 0.596 |
| rpoA | rpoZ | ebA3853 | ebA3495 | DNA-directed RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.994 |
| rpoB | ebA2146 | ebA3818 | ebA2146 | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Probable regulator protein containing CheR-and CheB-like domains. | 0.434 |
| rpoB | rpoA | ebA3818 | ebA3853 | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
| rpoB | rpoC | ebA3818 | ebA3819 | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoB | rpoE2 | ebA3818 | ebA5463 | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Sigma factor, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. | 0.656 |
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