Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA5472Similar to bacteriophage tail tape meausure protein. (1152 aa)    
Predicted Functional Partners:
ebA5483
Phage related protein (head-tail adaptor).
 
     0.734
ebA7267
Putative lysozyme.
  
  
 0.689
ebA5484
Putative phage portal protein.
 
   
 0.648
ebA5488
Phage terminase large subunit.
 
     0.595
ebB250
Conserved hypothetical protein.
 
   0.530
ebA5486
Conserved hypothetical protein,(putative major phage head protein/prohead proteinase).
 
    0.503
ebA7252
Hypothetical protein.
  
   0.462
ebA7278
Terminase (bacteriophage), large subunit.
 
    0.460
ebA5482
Putative phage related protein.
       0.456
ebD93
Hypothetical protein, possibly phage-related.
       0.445
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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