STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA5559Hypothetical protein. (197 aa)    
Predicted Functional Partners:
ebA5565
Putative carboxypeptidase.
 
 
   0.856
ebA5705
CoA ligase, AMP generating (three fragments in different reading frames).
  
 
 0.797
ebA5558
Hypothetical protein.
       0.773
ebA5595
Hypothetical protein.
 
     0.579
ebA5570
Conserved hypothetical protein,predicted autoinducer synthesis protein family.
 
     0.470
istB-28
Transposition helper protein.
       0.442
istA-31
Transposase.
       0.442
ebA6153
Hypothetical protein.
  
 
 
 0.413
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.