STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
s5h-2Putative salicylate monooxygenase. (397 aa)    
Predicted Functional Partners:
nagI-2
Putative gentisate 1,2-dioxygenase oxidoreductase protein.
 
  
 0.905
nagL-2
Probable maleylpyruvate isomerase.
  
  
 0.768
ebA127
Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein.
   
  
 0.648
ferA
Organic acid-CoA ligase (ADP forming),similar to feruloyl-CoA synthetase.
       0.623
nagI
Gentisate 1,2-dioxygenase.
 
  
 0.586
ebA2594
Hypothetical protein.
   
    0.514
ebA3186
Conserved hypothetical protein.
   
    0.514
ebA4977
Putative flavodoxin oxidoreductase precursor.
   
    0.514
ebA7152
Putative flavocytochrome subuit of an oxidoreductase.
   
    0.514
pheS
phenylalanyl-tRNA synthetase alpha chain; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
   
  
 0.514
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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