STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagI-2Putative gentisate 1,2-dioxygenase oxidoreductase protein. (336 aa)    
Predicted Functional Partners:
nagL
Maleylpyruvate isomerase.
 
  
 0.941
nagI
Gentisate 1,2-dioxygenase.
  
  
 
0.925
s5h-2
Putative salicylate monooxygenase.
 
  
 0.905
s5h
Putative salicylate 5-hydroxylase.
 
  
 0.778
nagL-2
Probable maleylpyruvate isomerase.
     
 0.761
ferA
Organic acid-CoA ligase (ADP forming),similar to feruloyl-CoA synthetase.
       0.628
pchF-2
Probable p-cresol methylhydroxylase subunit.
  
   
 0.626
pchF
Probable p-cresol methylhydroxylase subunit.
  
   
 0.620
ebA2758
Conserved hypothetical protein.
  
     0.580
ebA5686
TPP-containing decarboxylase related to benzoylformate decarboxylase or acetolactate synthase.
  
     0.547
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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