STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5643Acyl-CoA transferase, family III; Belongs to the CoA-transferase III family. (364 aa)    
Predicted Functional Partners:
caiB
Predicted acyl-CoA transferase; Belongs to the CoA-transferase III family.
  
  
 
0.916
ald-2
Putative benzaldehyde dehydrogenase.
  
 
 0.669
ebA5641
Acyl-CoA dehydrogenase.
 
 
 0.665
ebA5671
Predicted MaoC-like (R)-specific enoyl-CoA hydratase.
 
 
 0.585
ebA5640
Acyl-CoA transferase, family III; Belongs to the CoA-transferase III family.
 
    
0.566
ebA5668
Putative acyl-CoA dehydrogenase oxidoreductase protein.
 
 
 0.533
tioL
Predicted thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.529
ebA5797
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.524
ebA5644
Outer membrane porin protein, similar to precursor (OMP32).
       0.422
ebA5673
Predicted Acetyl-CoA acetyltransferase (thiolase).
 
  
 0.409
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.