close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5658Putative peptide ABC transporter permease protein. (304 aa)    
Predicted Functional Partners:
ebA5654
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.998
ebA5655
Putative peptide ABC transporter permease protein.
 
 0.998
ebA5660
Probable ABC transporter substrate binding protein.
 
 0.995
ebA6466
ATPase component ABC-type dipeptide/oligopeptide/nickel transport system; Belongs to the ABC transporter superfamily.
 
 0.995
oppB
Oligopeptide transport system permease protein oppB.
 
 0.993
oppC
Oligopeptide transport system permease protein.
  
  
 
0.925
oppA
Oligopeptide-binding protein oppA precursor.
 
 
 0.668
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.