STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pimDPutative pimeloyl-CoA dehydrogenase (EC 1.3.1.62). (379 aa)    
Predicted Functional Partners:
ebA5668
Putative acyl-CoA dehydrogenase oxidoreductase protein.
    
0.961
ebA2315
Fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase.
  
 0.880
etfA
Electron transfer flavoprotein alpha subunit.
 
 0.847
ebA5670
Putative dehydrogenase (Short chain alcohol dehydrogenase).
 
  0.819
ebA5671
Predicted MaoC-like (R)-specific enoyl-CoA hydratase.
 
 0.815
fadB
Alpha-subunit of fatty acid oxidation complex.
  
 0.771
ebA2038
Fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase.
  
 0.771
ferA-2
Organic acid-CoA ligase (ADP forming) similar to feruloyl-CoA synthetase.
  
    0.765
etfB
Electron transfer flavoprotein, beta-subunit.
 
 
 0.763
ebA5673
Predicted Acetyl-CoA acetyltransferase (thiolase).
 
 
 0.755
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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