STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ebA5673Predicted Acetyl-CoA acetyltransferase (thiolase). (387 aa)    
Predicted Functional Partners:
fadB
Alpha-subunit of fatty acid oxidation complex.
  
 0.994
ebA2038
Fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase.
  
 0.994
ebA2315
Fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase.
  
 0.994
ebB200
Conserved hypothetical protein,probable small subunit of thiolase encoded by ebA5673.
 
 
 0.978
c2A173
3-Hydroxyacyl-CoA dehydrogenase.
  
 0.961
paaH
3-Hydroxyacyl-CoA dehydrogenase PaaH involved in aerobic phenylacetate metabolism.
  
 0.961
hbdA
3-hydroxybutyryl-CoA dehydrogenase.
  
 0.961
ebA5620
3-hydroxyacyl-CoA dehydrogenase.
  
 0.961
ferA-2
Organic acid-CoA ligase (ADP forming) similar to feruloyl-CoA synthetase.
 
 
  0.954
ebA5641
Acyl-CoA dehydrogenase.
 
  0.950
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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