STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5677Putative transporter. (523 aa)    
Predicted Functional Partners:
ebA5673
Predicted Acetyl-CoA acetyltransferase (thiolase).
 
     0.575
ebB200
Conserved hypothetical protein,probable small subunit of thiolase encoded by ebA5673.
 
     0.575
idi1
Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
       0.527
ebA5671
Predicted MaoC-like (R)-specific enoyl-CoA hydratase.
 
     0.489
ebA5139
Metallo-beta-lactamase superfamily protein.
   
    0.454
ebA5857
Putative metallo-beta-lactamase family protein.
   
    0.454
ebA5670
Putative dehydrogenase (Short chain alcohol dehydrogenase).
 
    0.453
ebA5668
Putative acyl-CoA dehydrogenase oxidoreductase protein.
 
     0.438
pimD
Putative pimeloyl-CoA dehydrogenase (EC 1.3.1.62).
 
     0.405
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.