STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5688Hypothetical protein. (104 aa)    
Predicted Functional Partners:
hyfI
Subunit of putative formate hydrogenlyase-like membrane complex.
    
   0.621
tnp44
Transposase.
       0.572
ebA1809
Ferric uptake regulator; Belongs to the Fur family.
  
  
 0.541
fur
Ferric uptake regulation protein (Ferric uptake regulator); Belongs to the Fur family.
  
  
 0.541
ebA1813
ABC transporter, permease protein.
  
  
 0.532
ebA1814
ABC transporter, periplasmic binding protein precursor; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.528
tpx
Probable thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.
  
  
 0.522
ebA1812
ABC transporter ATP-binding protein.
  
  
 0.521
lepB
Signal peptidase I (SPase I) transmembrane protein; Belongs to the peptidase S26 family.
   
    0.445
traF
Similar to plasmid-like sex pilus assembly protein TraF.
   
    0.445
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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