STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fdhGPutative formaldehyde dehydrogenase (Glutathione-dependent); Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (371 aa)    
Predicted Functional Partners:
ebA5712
Putative esterase/lipase/thioesterase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.999
adhB
Alcohol dehydrogenase II.
   
 0.973
dhaL
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.914
betB
Putative betaine aldehyde dehydrogenase (BADH) oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
  
 0.914
aldB
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.914
tadA
Probable cytosine/adenosine deaminases; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.526
had
Probable 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase.
  
 
 
0.466
dusB
tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily.
    
   0.448
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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