STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
paaA2PaaA2 protein; Similar to aerobic phenylacetate degradation protein. (333 aa)    
Predicted Functional Partners:
paaC2
Similar to aerobic phenylacetate degradation protein.
 0.999
paaB2
PaaB2 protein; Similar to aerobic phenylacetate degradation protein.
 
 0.998
paaC
Putativ ring-hydroxylation complex protein 2.
 0.997
paaB
PaaB protein; Related to aerobic phenylacetate degradation.
 
 0.996
paaD2
Similar to aerobic phenylacetate degradation protein.
 
 
 0.995
paaE2
Similar to aerobic phenylacetate degradation protein.
 
 0.992
paaD
Putative ring oxidation complex protein 3.
 
 
 0.990
paaE
Probable ring-hydroxylation complex protein 4.
 
 0.984
paaI
Putative thioesterase PaaI involved in aerobic phenylacetate metabolism.
 
 
 0.980
paaA
Putativ ring-oxidation complex protein 1.
  
  
 
0.901
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.