STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
paaZ2Similar to aerobic phenylacetate degradation protein. (553 aa)    
Predicted Functional Partners:
paaE2
Similar to aerobic phenylacetate degradation protein.
 
  
 0.670
paaK2
Probable phenylacetate-coenzyme A ligase isoenzyme; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
   
 
 0.612
paaJ
Putative 3-ketoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.608
paaD2
Similar to aerobic phenylacetate degradation protein.
 
  
 0.578
paaC2
Similar to aerobic phenylacetate degradation protein.
 
  
 0.543
paaF
Putative enoyl-CoA hydratase protein.
  
 0.518
paaH
3-Hydroxyacyl-CoA dehydrogenase PaaH involved in aerobic phenylacetate metabolism.
 
 0.508
paaA2
PaaA2 protein; Similar to aerobic phenylacetate degradation protein.
 
  
 0.480
ackA-2
Similar to acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
 
 
 0.471
rocD
Probable bifunctional arginase/ornithine aminotransferase; Belongs to the arginase family.
  
 0.464
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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