STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ebA5761Putative oxidoreductase, Zinc-containing alcohol dehydrogenase. (331 aa)    
Predicted Functional Partners:
ebA5762
Hypothetical protein.
       0.709
ebA5763
Putative transporter.
       0.701
ebA5764
Conserved hypothetical protein, BNR domain protein.
       0.699
ebA5760
CoA ligase (AMP forming), possibly acetoacetyl-CoA synthetase.
  
  
 0.663
ebA5757
Conserved hypothetical protein possibly involved in regulation of phenolics degradation.
  
    0.577
ebA5705
CoA ligase, AMP generating (three fragments in different reading frames).
  
 
 0.461
ppiB
Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 
 0.408
ppiA
Peptidyl-prolyl cis-trans isomerase precursor (PPIase); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 
 0.402
ebA5766
Conserved hypothetical protein.
       0.401
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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