STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5823Putative Esterase/lipase/thioesterase family protein. (276 aa)    
Predicted Functional Partners:
ebA5705
CoA ligase, AMP generating (three fragments in different reading frames).
  
 
 0.771
ebA5826
Conserved hypothetical protein.
       0.700
ebA4853
Putative cation efflux protein.
 
      0.635
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.621
ebA1274
Conserved hypothetical protein.
  
     0.596
phbC
Putative poly-beta-hydroxybutyrate synthase.
  
  
 0.593
phbC-2
Poly-beta-hydroxybutyrate polymerase.
  
  
 0.556
ebA552
Conserved hypothetical protein.
  
     0.552
rec2
DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.518
phbC-5
Poly-beta-hydroxybutyrate synthase.
  
  
 0.488
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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