Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
acsA-3 | ebA4666 | ebA321 | ebA4666 | Acetoacetyl-CoA synthetase. | Putative acetoacetyl-CoA synthetase. | 0.908 |
acsA-3 | ebA5760 | ebA321 | ebA5760 | Acetoacetyl-CoA synthetase. | CoA ligase (AMP forming), possibly acetoacetyl-CoA synthetase. | 0.900 |
acsA-3 | ebA5833 | ebA321 | ebA5833 | Acetoacetyl-CoA synthetase. | Beta-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.901 |
acsA-3 | hmgL | ebA321 | ebA4662 | Acetoacetyl-CoA synthetase. | 3-hydroxymethylglutaryl-CoA or malyl-CoA lyase. | 0.924 |
acsA-3 | kctA | ebA321 | ebA4718 | Acetoacetyl-CoA synthetase. | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. | 0.907 |
acsA-3 | kctB | ebA321 | ebA4719 | Acetoacetyl-CoA synthetase. | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B. | 0.908 |
ebA4666 | acsA-3 | ebA4666 | ebA321 | Putative acetoacetyl-CoA synthetase. | Acetoacetyl-CoA synthetase. | 0.908 |
ebA4666 | ebA5760 | ebA4666 | ebA5760 | Putative acetoacetyl-CoA synthetase. | CoA ligase (AMP forming), possibly acetoacetyl-CoA synthetase. | 0.907 |
ebA4666 | ebA5833 | ebA4666 | ebA5833 | Putative acetoacetyl-CoA synthetase. | Beta-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.901 |
ebA4666 | hmgL | ebA4666 | ebA4662 | Putative acetoacetyl-CoA synthetase. | 3-hydroxymethylglutaryl-CoA or malyl-CoA lyase. | 0.967 |
ebA4666 | kctA | ebA4666 | ebA4718 | Putative acetoacetyl-CoA synthetase. | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. | 0.907 |
ebA4666 | kctB | ebA4666 | ebA4719 | Putative acetoacetyl-CoA synthetase. | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B. | 0.908 |
ebA5671 | ebA5833 | ebA5671 | ebA5833 | Predicted MaoC-like (R)-specific enoyl-CoA hydratase. | Beta-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.838 |
ebA5760 | acsA-3 | ebA5760 | ebA321 | CoA ligase (AMP forming), possibly acetoacetyl-CoA synthetase. | Acetoacetyl-CoA synthetase. | 0.900 |
ebA5760 | ebA4666 | ebA5760 | ebA4666 | CoA ligase (AMP forming), possibly acetoacetyl-CoA synthetase. | Putative acetoacetyl-CoA synthetase. | 0.907 |
ebA5760 | ebA5833 | ebA5760 | ebA5833 | CoA ligase (AMP forming), possibly acetoacetyl-CoA synthetase. | Beta-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.901 |
ebA5760 | hmgL | ebA5760 | ebA4662 | CoA ligase (AMP forming), possibly acetoacetyl-CoA synthetase. | 3-hydroxymethylglutaryl-CoA or malyl-CoA lyase. | 0.924 |
ebA5760 | kctA | ebA5760 | ebA4718 | CoA ligase (AMP forming), possibly acetoacetyl-CoA synthetase. | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. | 0.907 |
ebA5760 | kctB | ebA5760 | ebA4719 | CoA ligase (AMP forming), possibly acetoacetyl-CoA synthetase. | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B. | 0.908 |
ebA5831 | ebA5833 | ebA5831 | ebA5833 | Hypothetical protein. | Beta-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.520 |
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