STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5855Probable ATP-dependent DNA helicase. (466 aa)    
Predicted Functional Partners:
recG
RecG-like helicases; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
    
  0.901
ebA5857
Putative metallo-beta-lactamase family protein.
       0.773
hsdS
Restriction modification system specificity subunit.
 
    0.647
hsdR
Type I restriction-modification system endonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
    0.587
ebA5917
Conserved hypothetical protein.
 
    0.583
ebA675
Conserved hypothetical protein, potential type III restriction enzyme.
 
    0.562
ebA5853
Hypothetical protein.
       0.561
ebA6581
Conserved hypothetical protein.
  
    0.486
ebA5860
Predicted ARSR subfamily of helix-turn-helix bacterial transcription regulatory protein.
       0.463
ebA671
Conserved hypothetical protein.
 
     0.455
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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