STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wzxProbably involved in the export of O-antigen (flippase Wzx). (441 aa)    
Predicted Functional Partners:
ebA5887
Probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis.
 
  
 0.945
ebA5884
Hypothetical protein.
 
  
 0.933
ebA5879
Similar to lipopolysaccharide biosynthesis RfbU-related protein.
 
  
 0.904
capG
Similar to Protein capG, involved in capsular polysaccharide (CPS) biosynthesis.
 
  
 0.840
ebA5875
Similar to galactoside O-acetyltransferase.
 
  
 0.829
wcaJ
Colanic biosynthesis UDP-glucose lipid carrier transferase.
  
  
 0.823
ebA5881
Predicted glycosyl transferase.
  
  
 0.810
wbjB
Similar to polysaccharide biosynthesis protein.
  
  
 0.760
ebA5880
Hypothetical protein.
       0.746
rffG
DTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.742
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.