STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA5879Similar to lipopolysaccharide biosynthesis RfbU-related protein. (390 aa)    
Predicted Functional Partners:
ebA5884
Hypothetical protein.
 
     0.931
ebA5887
Probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis.
 
  
 0.920
wzx
Probably involved in the export of O-antigen (flippase Wzx).
 
  
 0.906
wbjB
Similar to polysaccharide biosynthesis protein.
 
  
 0.864
ebA5880
Hypothetical protein.
       0.792
ebA5881
Predicted glycosyl transferase.
       0.773
capG
Similar to Protein capG, involved in capsular polysaccharide (CPS) biosynthesis.
  
  
 0.761
ebA5890
Predicted UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.755
ebA5875
Similar to galactoside O-acetyltransferase.
  
  
 0.752
ebD105
Fragment of putative epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.614
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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