STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5881Predicted glycosyl transferase. (382 aa)    
Predicted Functional Partners:
wzx
Probably involved in the export of O-antigen (flippase Wzx).
  
  
 0.814
ebA5887
Probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis.
  
  
 0.809
ebA5884
Hypothetical protein.
 
     0.799
ebA5875
Similar to galactoside O-acetyltransferase.
 
  
 0.789
capG
Similar to Protein capG, involved in capsular polysaccharide (CPS) biosynthesis.
 
  
 0.784
ebA5879
Similar to lipopolysaccharide biosynthesis RfbU-related protein.
       0.773
ebA5880
Hypothetical protein.
       0.773
wbjB
Similar to polysaccharide biosynthesis protein.
  
  
 0.728
ebA4275
Putative glycosyl transferase, gene fragment.
  
     0.726
wbpP
WbpP.
 
    0.705
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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