STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA5893Predicted glycosyltransferase. (409 aa)    
Predicted Functional Partners:
ebA5890
Predicted UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.952
ebA5887
Probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis.
 
  
 0.914
wbjB
Similar to polysaccharide biosynthesis protein.
 
  
 0.876
ebD105
Fragment of putative epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.785
ebA5884
Hypothetical protein.
 
     0.752
ebA5889
Conserved hypothetical protein.
       0.752
wbpI
UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.720
ebA5901
Predicted nucleoside-diphosphate sugar epimerases.
 
  
 0.641
wecE
Perosamine synthetase; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.620
ebA5879
Similar to lipopolysaccharide biosynthesis RfbU-related protein.
 
     0.597
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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