STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5903Probable sugar transferase, WBGY. (225 aa)    
Predicted Functional Partners:
wecE
Perosamine synthetase; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.919
ebA5901
Predicted nucleoside-diphosphate sugar epimerases.
 
  
 0.909
gumC
Exopolysaccharide biosynthesis protein.
 
  
 0.875
algA
Putative mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.838
ebA5907
Putative nucleoside-diphosphate sugar epimerase.
 
  
 0.685
ebA4250
Probable exopolysaccharide biosynthesis protein.
 
  
 0.662
wbbJ
Predicted acetyltransferase (isoleucine patch superfamily).
  
  
 0.660
ebA1626
Putative glycosyl transferase.
  
 0.643
ebA5899
Hypothetical protein.
       0.620
ebA5895
Hypothetical ATP-binding protein.
       0.618
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.