STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA5907Putative nucleoside-diphosphate sugar epimerase. (634 aa)    
Predicted Functional Partners:
wecE
Perosamine synthetase; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.899
algA
Putative mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.792
gumC
Exopolysaccharide biosynthesis protein.
 
  
 0.725
ebA5903
Probable sugar transferase, WBGY.
 
  
 0.676
ebA5887
Probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis.
 
  
 0.591
wbbJ
Predicted acetyltransferase (isoleucine patch superfamily).
  
  
 0.520
ebA5893
Predicted glycosyltransferase.
 
  
 0.509
ebA5909
Predicted nucleic acid-binding protein,contains PIN domain.
       0.509
ebB204
Conserved hypothetical protein, antitoxin of prevent-host-death family; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.509
ebA5901
Predicted nucleoside-diphosphate sugar epimerases.
 
    
0.507
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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