STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA5917Conserved hypothetical protein. (429 aa)    
Predicted Functional Partners:
ebA5895
Hypothetical ATP-binding protein.
 
     0.715
phbZ
Poly(3-hydroxybutyrate) depolymerase.
  
     0.692
ebA5913
Conserved hypothetical protein.
 
     0.587
ebA1234
Hypothetical protein.
  
     0.499
ebA602
Glycosyltransferase family protein.
 
     0.489
ebA5899
Hypothetical protein.
 
     0.454
ebA2903
Conserved hypothetical protein.
  
     0.452
ebA6099
Conserved hypothetical protein,predicted methyltransferase.
  
    0.446
phbZ-3
Poly(3-hydroxybutyrate) depolymerase.
  
     0.435
ebB83
Conserved hypothetical protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
  
     0.431
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.