Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ebA5975Probable binding-protein-dependent transport system protein. (516 aa)    
Predicted Functional Partners:
gumC
Exopolysaccharide biosynthesis protein.
 
  
 0.838
gumB
Polysaccharide export protein.
 
  
 0.806
ebA6787
Hypothetical protein.
 
   
 0.804
capC
Capsular polysaccharide biosynthesis protein.
 
    0.773
wcaJ
Colanic biosynthesis UDP-glucose lipid carrier transferase.
 
  
 0.663
VapC
Predicted nucleic acid-binding protein,contains PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.565
ebD16
Conserved hypothetical protein.
       0.565
algA
Putative mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.564
ebA1598
Hypothetical protein.
  
     0.558
wzx
Probably involved in the export of O-antigen (flippase Wzx).
 
  
 0.469
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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