Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA6069Conserved hypothetical protein,putatively exported via twin-arginine system. (192 aa)    
Predicted Functional Partners:
ebB214
Putative cytochrome c.
 
    0.786
ascD
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehyd rase reductase.
  
 
 0.613
ebA521
Hypothetical protein.
  
     0.549
ebA3176
Hypothetical protein.
  
     0.537
ebA4230
Hypothetical protein.
  
     0.537
ebA2435
Conserved hypothetical plasmid protein.
  
     0.485
ebA2554
Conserved hypothetical protein.
  
     0.477
norVW
Fusion protein of nitric oxide reductase (flavorubredoxin NorV) with its associated reductase (NorW).
  
  
 0.441
int-6
Phage-related integrase.
  
     0.415
ebB19
Conserved hypothetical protein.
  
    0.415
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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