Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cheR | ebA2146 | ebA790 | ebA2146 | Methylase of chemotaxis methyl-accepting protein. | Probable regulator protein containing CheR-and CheB-like domains. | 0.981 |
| cheR | rpoE3 | ebA790 | ebA6072 | Methylase of chemotaxis methyl-accepting protein. | ECF-family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.508 |
| ebA1278 | rpoE3 | ebA1278 | ebA6072 | Hypothetical protein. | ECF-family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.497 |
| ebA2146 | cheR | ebA2146 | ebA790 | Probable regulator protein containing CheR-and CheB-like domains. | Methylase of chemotaxis methyl-accepting protein. | 0.981 |
| ebA2146 | ebA7069 | ebA2146 | ebA7069 | Probable regulator protein containing CheR-and CheB-like domains. | Hypothetical protein. | 0.764 |
| ebA2146 | rpoB | ebA2146 | ebA3818 | Probable regulator protein containing CheR-and CheB-like domains. | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.434 |
| ebA2146 | rpoE3 | ebA2146 | ebA6072 | Probable regulator protein containing CheR-and CheB-like domains. | ECF-family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.588 |
| ebA6073 | rpoE3 | ebA6073 | ebA6072 | Conserved hypothetical protein. | ECF-family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.608 |
| ebA7069 | ebA2146 | ebA7069 | ebA2146 | Hypothetical protein. | Probable regulator protein containing CheR-and CheB-like domains. | 0.764 |
| ebA7069 | rpoE3 | ebA7069 | ebA6072 | Hypothetical protein. | ECF-family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.508 |
| rpoA | rpoB | ebA3853 | ebA3818 | DNA-directed RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
| rpoA | rpoC | ebA3853 | ebA3819 | DNA-directed RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
| rpoA | rpoE3 | ebA3853 | ebA6072 | DNA-directed RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | ECF-family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.596 |
| rpoA | rpoZ | ebA3853 | ebA3495 | DNA-directed RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.994 |
| rpoB | ebA2146 | ebA3818 | ebA2146 | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Probable regulator protein containing CheR-and CheB-like domains. | 0.434 |
| rpoB | rpoA | ebA3818 | ebA3853 | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
| rpoB | rpoC | ebA3818 | ebA3819 | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoB | rpoE3 | ebA3818 | ebA6072 | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | ECF-family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.656 |
| rpoB | rpoZ | ebA3818 | ebA3495 | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.989 |
| rpoC | rpoA | ebA3819 | ebA3853 | DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
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