STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6116Putative beta-(1-3)-glucosyl transferase. (905 aa)    
Predicted Functional Partners:
ebD78
Hypothetical protein.
 
 
 0.786
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
 
 
 0.781
c2A200
Hypothetical protein.
  
 
 0.753
ebA1575
Conserved hypothetical protein.
  
 
 0.753
ebA7200
Hypothetical protein.
  
 
 0.753
ebA4258
Polysaccharide deacetylase.
  
  
 0.707
ebA4281
Conserved hypothetical protein.
  
  
 0.707
ebA4315
Conserved hypothetical protein.
  
  
 0.707
ebA7067
Predicted polysaccharide deacetylase.
  
  
 0.707
ebA6328
Complex sensory protein with histidine kinase domain.
  
  
 0.685
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.