STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA6153Hypothetical protein. (156 aa)    
Predicted Functional Partners:
ebA6152
Conserved hypothetical protein.
 
     0.952
cutA2
Thiol-disulfide interchange protein,potentially involved in divalent cation resistance; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily.
 
 
 0.760
ebA1863
Hypothetical protein.
  
     0.738
ahpC
Predicted peroxiredoxin.
  
 0.727
ebA4246
Long-chain N-acyl amino acid synthase.
 
 
 0.686
amiC
Potential peptidoglycan amidase, C-terminal fragment.
  
     0.632
ebA5705
CoA ligase, AMP generating (three fragments in different reading frames).
 
 
 
 0.628
ebA6149
Putative TonB-dependent receptor.
 
     0.627
ebA6147
Conserved hypothetical protein.
   
 
 0.607
ebA4352
Similar to transmembrane protein.
  
     0.601
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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