STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA6171Predicted carbonic anhydrases / acetyltransferases, isoleucine patch superfamily. (180 aa)    
Predicted Functional Partners:
can
Carbonic anhydrase, beta family; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 
 0.598
ebA3637
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
   
 
 0.591
rlmJ
Predicted protein involved in catabolism of external DNA; Specifically methylates the adenine in position 2030 of 23S rRNA.
       0.556
ebA6173
Conserved hypothetical protein.
       0.551
ebA6169
Conserved hypothetical protein.
       0.437
ebD110
Hypothetical protein.
       0.416
pyrX
Dihydroorotase-like protein.
  
  
 0.412
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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