Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ebA6177Hypothetical protein. (109 aa)    
Predicted Functional Partners:
ebA6176
Phosphate permease.
       0.651
ptsH
Sugar transport PTS system phosphocarrier protein HPR.
    
 
 0.613
ebA791
Probable complex regulator protein containing response regulator receiver and signal transduction histidine kinase domains.
   
 
 0.552
ebA1737
Putative TonB protein.
  
     0.546
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
   
 
 0.535
rlmJ
Predicted protein involved in catabolism of external DNA; Specifically methylates the adenine in position 2030 of 23S rRNA.
       0.467
ebA6173
Conserved hypothetical protein.
       0.458
gspI
General secretion pathway protein I.
  
   
 0.416
qhpA
Quinohemoprotein amine dehydrogenase, 60 kDa subunit.
  
     0.402
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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