Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA6215Hypothetical protein. (286 aa)    
Predicted Functional Partners:
ebA864
Conserved hypothetical protein.
 
 0.956
ebA2804
Conserved hypothetical protein.
  
 0.886
ebA6104
Sensory protein with histidine kinase domain.
 
 0.872
ebA1086
Conserved hypothetical protein.
 
 0.860
ebA6322
Hypothetical protein.
 
 0.853
ebA5744
Conserved hypothetical protein.
  
 0.836
ebA1787
Conserved hypothetical protein.
 
  
 0.801
ebA784
Conserved hypothetical protein.
 
  
 0.794
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
  
 
 0.756
ebA2985
Putative diguanylate cyclase/phosphodiesterase domain 2 (EAL).
 
 
0.689
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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