STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
Experiments
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[Homology]
Score
ebA6240Putative Oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (263 aa)    
Predicted Functional Partners:
ebA6241
Conserved hypothetical protein,predicted heme oxygenase family.
 
   
 0.952
ebA6242
Putative long-chain-fatty-acid-CoA ligase.
 
   
 0.951
ebA6236
Conserved hypothetical protein.
 
     0.942
ebA6243
Conserved hypothetical protein.
 
   
 0.918
ebA6233
Sensor histidine kinase.
 
   
 0.821
ebA6235
DNA-binding response regulator.
 
   
 0.698
ebA5705
CoA ligase, AMP generating (three fragments in different reading frames).
  
 
 0.616
bbsC
Subunit of 2-[hydroxy(phenyl)methyl]-succinyl-CoA DH.
 
 
 
 0.585
ebA598
Conserved hypothetical protein,predicted sulfatase family.
 
     0.573
ebA6245
Hypothetical protein.
       0.521
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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