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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6253ABC transporter, ATP-binding protein of putative efflux system. (236 aa)    
Predicted Functional Partners:
ebA6251
ABC transporter, permease protein.
 
 
 0.988
ebA6248
Similar to efflux transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.973
ebA6247
Transcriptional regulator TetR family.
 
 
 
 0.956
ebA4058
Putative ABC transporter protein.
 
 0.922
ebA4059
Putative ABC transporter protein.
 
 0.920
ebA5819
Conserved hypothetical protein.
  
 
 0.754
ebA6805
Conserved hypothetical protein.
  
 
 0.754
lolA
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.710
macB
Transmembrane ATP-binding ABC transporter protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
0.683
ebA1861
Similar to uncharacterized protein probably involved in high-affinity Fe2+ transport.
  
    0.517
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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