STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nosFPutative ATP-binding protein. (316 aa)    
Predicted Functional Partners:
nosY
Probable transmembrane protein.
 
 
 0.983
nosL
Putative lipoprotein.
 
  
 0.959
nosD
Putative copper binding periplasmic protein.
 
  
 0.958
nosR
NosR transcription regulator (N-terminal domain), contains 4Fe-4S cluster.
 
  
 0.951
nosZ
Nitrous-oxide reductase.
 
  
 0.880
nosR-2
NosR (C-terminal domain).
  
  
 0.851
ebD113
Hypothetical protein.
       0.779
atpC
F1-ATP synthase, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.558
atpD
F1-ATP synthase, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
 
 0.541
ebA5186
ABC efflux transporter, permease/ATP-binding protein.
 
0.477
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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