STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6291Conserved hypothetical protein. (420 aa)    
Predicted Functional Partners:
ebA6294
Conserved hypothetical protein.
 
     0.951
ebA6293
Hypothetical protein.
 
     0.945
cycA
Di-heme cytochrome c (class I), probably related to cytochrome c oxidase function.
  
 
 0.879
ccoO
Cytochrome oxidase, cytochrome c subunit.
  
 
 0.870
ccoO-2
Cytochrome-cbb3 oxidase, subunit II.
  
 
 0.870
ccoQ
Cytochrome c oxidase subunit.
  
  
 0.759
ebA186
Iron-sulfur cluster-binding protein.
 
  
 0.717
nirN
Probable c-type cytochrome.
 
 
 0.685
ebA4518
Hypothetical protein.
 
     0.670
petB
Cytochrome B subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.608
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.