Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroC-2 | ebA3882 | ebA4753 | ebA3882 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Conserved hypothetical protein, putative Glycosyl transferase, family 3. | 0.460 |
| aroC-2 | pabA | ebA4753 | ebA4199 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate synthase (Component II). | 0.961 |
| aroC-2 | pabB | ebA4753 | ebA6309 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Putative PARA-aminobenzoate synthetase component I protein. | 0.941 |
| aroC-2 | pheA | ebA4753 | ebA906 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Chorismate mutase/prephenate dehydratase. | 0.989 |
| aroC-2 | trpA | ebA4753 | ebA4776 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Probable tryptophan synthase (Alpha chain) protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.852 |
| aroC-2 | trpB | ebA4753 | ebA4775 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.742 |
| aroC-2 | trpC | ebA4753 | ebA4201 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.518 |
| aroC-2 | trpD | ebA4753 | ebA4200 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.561 |
| aroC-2 | trpF | ebA4753 | ebB163 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. | 0.417 |
| dhpS | pabA | ebA4824 | ebA4199 | Dihydropteroate synthase. | Anthranilate synthase (Component II). | 0.678 |
| dhpS | pabB | ebA4824 | ebA6309 | Dihydropteroate synthase. | Putative PARA-aminobenzoate synthetase component I protein. | 0.977 |
| ebA3882 | aroC-2 | ebA3882 | ebA4753 | Conserved hypothetical protein, putative Glycosyl transferase, family 3. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.460 |
| ebA3882 | pabA | ebA3882 | ebA4199 | Conserved hypothetical protein, putative Glycosyl transferase, family 3. | Anthranilate synthase (Component II). | 0.825 |
| ebA3882 | pabB | ebA3882 | ebA6309 | Conserved hypothetical protein, putative Glycosyl transferase, family 3. | Putative PARA-aminobenzoate synthetase component I protein. | 0.955 |
| ebA3882 | pheA | ebA3882 | ebA906 | Conserved hypothetical protein, putative Glycosyl transferase, family 3. | Chorismate mutase/prephenate dehydratase. | 0.552 |
| ebA3882 | trpA | ebA3882 | ebA4776 | Conserved hypothetical protein, putative Glycosyl transferase, family 3. | Probable tryptophan synthase (Alpha chain) protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.855 |
| ebA3882 | trpB | ebA3882 | ebA4775 | Conserved hypothetical protein, putative Glycosyl transferase, family 3. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.839 |
| ebA3882 | trpC | ebA3882 | ebA4201 | Conserved hypothetical protein, putative Glycosyl transferase, family 3. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.839 |
| ebA3882 | trpF | ebA3882 | ebB163 | Conserved hypothetical protein, putative Glycosyl transferase, family 3. | N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. | 0.840 |
| pabA | aroC-2 | ebA4199 | ebA4753 | Anthranilate synthase (Component II). | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.961 |
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