STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6362Putative endonuclease. (331 aa)    
Predicted Functional Partners:
padI
Phenylglyoxylate:acceptor oxidoreductase.
   
   0.860
ebA1012
Molybdenum enzyme of unknown function,medium subunit.
   
    0.828
fdhB-2
Formate dehydrogenase iron-sulfur subunit.
   
    0.828
ttrB
Subunit B of a molybdenum enzyme, similar to that of tetrathionate reductase (TTRB).
   
    0.828
ebA5004
Iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase.
   
    0.828
padC
Phenylacetyl-CoA:acceptor oxidoreductase.
   
    0.828
padC2
Molybdenum enzyme, medium subunit,related to phenylacetyl-CoA: acceptor oxidoreductase.
   
    0.828
ebA6435
Molybdenum enzyme related to thiosulfate reductase and polysulfide reductase, medium subunit.
   
    0.828
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.711
hsdM
Type I site-specific deoxyribonuclease,methylase subunit.
  
  
 0.696
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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