STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA6367Putative aminotransferase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (428 aa)    
Predicted Functional Partners:
ebA6366
Hypothetical protein.
  
 
 0.981
iscU
IscU protein involved in Fe-S cluster formation; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
  
 0.962
ebD53
Possible NifU homolog.
 
 
 0.933
trxB-2
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.931
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
    
 0.919
trxB
Thioredoxin reductase.
  
 
 0.910
ebB223
Conserved hypothetical protein.
 
  
 0.751
ebA4126
Predicted endonuclease / exonuclease / phosphatase family protein.
   
   0.683
ebA6951
Conserved hypothetical protein,predicted Endonuclease / exonuclease / phosphatase family.
   
   0.683
ebA4857
Conserved hypothetical protein, putative endonuclease / exonuclease / phosphatase.
   
   0.681
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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