STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA6439Sensor histidine kinase. (482 aa)    
Predicted Functional Partners:
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
 
 
0.905
ebA6722
Histidine kinase.
 
 
 
0.877
atoC-2
Acetoacetate metabolism regulatory protein atoC.
 
 
   0.866
ebA6438
Conserved hypothetical protein, potential periplasmic binding protein.
 
   
 0.848
ebA791
Probable complex regulator protein containing response regulator receiver and signal transduction histidine kinase domains.
 
 
 0.832
ebA168
Protein containing response regulator domain, but no DNA binding domain.
 
   0.796
pilH
Type IV pilus response regulator PilH.
 
   0.746
ebD118
CheY-like response regulator domain.
 
 
 0.738
tdiS
Two-component sensor.
 
 
 
 0.727
ompR
DNA-binding response regulator OmpR.
 
   0.720
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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